Tamayo, Elisabeth; López-Lorca, Víctor Manuel; Shim, Chaeeun; López-Castillo, Olga; Castillo, Araceli G.; Requena, Natalia; Benz, J. Philipp; Ferrol, Nuria: The Rhizophagus irregularis permease RiFTR1 functions without a ferroxidase partner for reductive iron transport. Scientific Reports 15 (1), 2025 more…BibTeX
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2024
Journal Articles
Knesebeck, Melanie; Rüllke, Marcel; Schönrock, Veronika; Benz, J. Philipp; Weuster-Botz, Dirk: D-Xylitol Production from Sugar Beet Press Pulp Hydrolysate with Engineered Aspergillus niger. Microorganisms 12 (12), 2024, 2489 more…BibTeX
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Nussbaumer, Marcello; Karl, Tanja; Benz, J. Philipp: Quantification of fungal biomass in mycelium composites made from diverse biogenic side streams. Fungal Biology and Biotechnology 11 (1), 2024 more…BibTeX
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Rüllke, Marcel; Meyer, Franziska; Schmitz, Kevin; Blase, Hannes; Tamayo, Elisabeth; Benz, J. Philipp: A novel luciferase‐based reporter tool to monitor the dynamics of carbon catabolite repression in filamentous fungi. Microbial Biotechnology 17 (9), 2024 more…BibTeX
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Rüllke, Marcel; Schönrock, Veronika; Schmitz, Kevin; Oreb, Mislav; Tamayo, Elisabeth; Benz, J. Philipp: Engineering of Aspergillus niger for efficient production of d-xylitol from l-arabinose. Microbial Cell Factories 23 (1), 2024 more…BibTeX
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Stange, Pia; Kersting, Johannes; Sivaprakasam Padmanaban, Prasath Balaji; Schnitzler, Jörg-Peter; Rosenkranz, Maaria; Karl, Tanja; Benz, J. Philipp: The decision for or against mycoparasitic attack by Trichoderma spp. is taken already at a distance in a prey-specific manner and benefits plant-beneficial interactions. Fungal Biology and Biotechnology 11 (1), 2024 more…BibTeX
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Tamayo, Elisabeth; Nada, Basant; Hafermann, Isabell; Benz, J. Philipp: Correlating sugar transporter expression and activities to identify transporters for an orphan sugar substrate. Applied Microbiology and Biotechnology 108 (1), 2024 more…BibTeX
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Zhang, Yuxin; Nada, Basant; Baker, Scott E.; Evans, James E.; Tian, Chaoguang; Benz, J. Philipp; Tamayo, Elisabeth: Unveiling a classical mutant in the context of the GH3 β-glucosidase family in Neurospora crassa. AMB Express 14 (1), 2024 more…BibTeX
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2023
Journal Articles
Knesebeck, M.; Schäfer, D.; Schmitz, K.; Rüllke, M.; Benz, J.P.; Weuster-Botz, D.: Enzymatic One-Pot Hydrolysis of Extracted Sugar Beet Press Pulp after Solid-State Fermentation with an Engineered Aspergillus niger Strain. Fermentation 9 (7), 2023, 582 more…BibTeX
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Nussbaumer, M.,Van Opdenbosch, D., Engelhardt, M., Briesen, H., Benz, J. P., Karl, T.: Material characterization of pressed and unpressed wood–mycelium composites derived from two Trametes species. Environmental Technology & Innovation 30, 2023, 103063 more…BibTeX
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Stange, P.; Seidl, S.; Karl, T.; Benz, J.P.: Evaluation of Trichoderma isolates as biocontrol measure against Claviceps purpurea. European Journal of Plant Pathology, 2023 more…BibTeX
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Vidal, M.L.; Wittenkamp, T.; Benz, J.P.; Jekle, M.; Becker, T.: A dynamic micro-scale dough foaming and baking analysis – Comparison of dough inflation based on different leavening agents. Food Research International 164, 2023, 112342 more…BibTeX
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Misc.
Mitterer, Moritz: Neophytische Baumarten und ihre Eignung zur Herstellung von Pilzkompositen auf Basis von drei Weißfäulepilzen. Bachelorarbeit, 2023 more…BibTeX
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2022
Journal Articles
Reppke, M.J.; Gerstner, R.; Windeisen-Holzhauser, E.; Richter, K.; Benz, J.P.: Press water from the mechanical drying of Douglas-fir wood chips has multiple beneficial effects on lignocellulolytic fungi. Fungal Biology and Biotechnology 9 (1), 2022 more…BibTeX
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2021
Journal Articles
Gabriel, R., Thieme, Ni., Liu, Q., Li, F., Kohler, L. T. Harth, S., Jecmenica, M., Ramamurthy, M., Gorman, J., Simmons, B. A.,McCluskey, K., Baker, S. E., Tian, C., Schuerg, T., Singer, S. W., Fleißner, A., Benz, J. P.: The F-box protein gene exo-1 is a target for reverse engineering enzyme hypersecretion in filamentous fungi. Proceedings of the National Academy of Sciences 118 (26), 2021, e2025689118 more…BibTeX
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Guo, Y., Jud, W., Weikl, F., Ghirardo, A., Junker, R. R. Polle, A., Benz, J. P., Pritsch, K., Schnitzler, J.-P. Rosenkranz, M.: Volatile organic compound patterns predict fungal trophic mode and lifestyle. Communications Biology 4 (1), 2021 more…BibTeX
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Kölle, M., Crivelente H. M. A.; Benz, J. P., Pilgård, A.: Comparative Transcriptomics During Brown Rot Decay in Three Fungi Reveals Strain-Specific Degradative Strategies and Responses to Wood Acetylation. Frontiers in Fungal Biology 2, 2021 more…BibTeX
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Wagner, J., Schäfer, D., von den Eichen, N. Haimerl, C., Harth, S.; Oreb, M., Benz, J. P., Weuster-Botz, D.: D-Galacturonic acid reduction by S. cerevisiae for L-galactonate production from extracted sugar beet press pulp hydrolysate. Applied Microbiology and Biotechnology, 2021 more…BibTeX
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2020
Journal Articles
Benz, J.P., Chen, S., Dang, S., Dieter, M., Labelle, E., Liu, G., Hou, L., Mosandl, M., Pretzsch, H., Pukall, K., Richter, K., Ridder, R., Sun, S., Song, X., Wang, Y., Xian, H., Yan, L., Yuan, J., Zhang, S., Fischer, A.: Multifunctionality of Forests: A White Paper on Challenges and Opportunities in China and Germany. Forests 11 (3), 2020, 266 more…BibTeX
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Guo, Y.; Jud, W.; Ghirardo, A.; Antritter, F.; Benz, J. P.; Schnitzler, J.‐P.; Rosenkranz, M.: Sniffing fungi – phenotyping of volatile chemical diversity in Trichoderma species. New Phytologist 227 (1), 2020, 244-259 more…BibTeX
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Harth, S.; Wagner, J.; Sens, T.; Choe, J.; Benz, J. P.; Weuster-Botz, D.; Oreb, M.: Engineering cofactor supply and NADH-dependent d-galacturonic acid reductases for redox-balanced production of l-galactonate in Saccharomyces cerevisiae. Scientific Reports 10 (1), 2020 more…BibTeX
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Kölle, M., Horta, M. A. C., Nowrousian, M., Ohm, R. A., Benz, J. P., Pilgård, A.: Degradative Capacity of Two Strains of Rhodonia placenta: From Phenotype to Genotype. Frontiers in Microbiology 11, 2020 more…BibTeX
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Mattos, E. C.; Silva, L. P.; Valero, C.; de Castro, P. A.; dos Reis, T. F.; Ribeiro, L. F. C.; Marten, M. R.; Silva-Rocha, R.; Westmann, C.; da Silva, C. H. Tomich de Paula; Taft, C. A.; Al-Furaiji, N.; Bromley, M.; Mortensen, U. H.; Benz, J. P.; Brown, N. A.; Goldman, G.H.: The Aspergillus fumigatus Phosphoproteome Reveals Roles of High-Osmolarity Glycerol Mitogen-Activated Protein Kinases in Promoting Cell Wall Damage and Caspofungin Tolerance. mBio 11 (1), 2020 more…BibTeX
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Meyer, V.; Basenko, E. Y.; Benz, J. P.; Braus, G. H.; Caddick, M. X.; Csukai, M.; de Vries, R. P.; Endy, D.; Frisvad, J. C.; Gunde-Cimerman, N.; Haarmann, T.; Hadar, Y.; Hansen, K.; Johnson, R. I.; Keller, N. P.; Kraševec, N.; Mortensen, U. H.; Perez, R.; Ram, A. F. J.; Record, E.; Ross, P.; Shapaval, V.; Steiniger, C.; van den Brink, H.; van Munster, J.; Yarden, O.; Wösten, H. A. B.: Growing a circular economy with fungal biotechnology: a white paper. Fungal Biology and Biotechnology 7 (1), 2020 more…BibTeX
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Schäfer, D.; Schmitz, K.; Weuster-Botz, D.; Benz, J. P.: Comparative evaluation of Aspergillus niger strains for endogenous pectin-depolymerization capacity and suitability for d-galacturonic acid production. Bioprocess and Biosystems Engineering 43 (9), 2020, 1549-1560 more…BibTeX
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Wanschura, R.; Baumgartner, M.; Linder, C. U.; Windeisen, E.; Benz, J. P.; Richter, K.: Direct bioautography for the screening of selected tropical wood extracts against basidiomycetes. Holzforschung 0 (0), 2020 more…BibTeX
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Wu, V. W.; Thieme, N.; Huberman, L. B.; Dietschmann, A.; Kowbel, D. J.; Lee, J.; Calhoun, S.; Singan, V. R.; Lipzen, A.; Xiong, Y.; Monti, R.; Blow, M.J.; O’Malley, R.C.; Grigoriev, I. V.; Benz, J. P.; Glass, N. L.: The regulatory and transcriptional landscape associated with carbon utilization in a filamentous fungus. Proceedings of the National Academy of Sciences 117 (11), 2020, 6003-6013 more…BibTeX
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2019
Journal Articles
Guo, Y.; Ghirardo, A.; Weber, B.; Schnitzler, J.-P.; Benz, J. P.; Rosenkranz, M.: Trichoderma Species Differ in Their Volatile Profiles and in Antagonism Toward Ectomycorrhiza Laccaria bicolor. Frontiers in Microbiology 10, 2019 more…BibTeX
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Hassan, L.; Lin, L.; Sorek, H.; Sperl, L. E.; Goudoulas, T.; Hagn, F.; Germann, N.; Tian, C.; Benz, J. P.: Crosstalk of Cellulose and Mannan Perception Pathways Leads to Inhibition of Cellulase Production in Several Filamentous Fungi. mBio 10 (4), 2019 more…BibTeX
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Horta, M. A. C.; Thieme, N.; Gao, Y.; Burnum-Johnson, K. E.; Nicora, C. D.; Gritsenko, M. A.; Lipton, M.S.; Mohanraj, K.; de Assis, L. J.; Lin, L.; Tian, C.; Braus, G. H.; Borkovich, K. A.; Schmoll, M.; Larrondo, L. F.; Samal, A.; Goldman, G. H.; Benz, J. P.: Broad Substrate-Specific Phosphorylation Events Are Associated With the Initial Stage of Plant Cell Wall Recognition in Neurospora crassa. Frontiers in Microbiology 10, 2019 more…BibTeX
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Lehenberger, M.; Biedermann, P. H.W.; Benz, J. P.: Molecular identification and enzymatic profiling of Trypodendron (Curculionidae: Xyloterini) ambrosia beetle-associated fungi of the genus Phialophoropsis (Microascales: Ceratocystidaceae). Fungal Ecology 38, 2019, 89-97 more…BibTeX
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Lehenberger, M.; Thalhammer, M.; Benz, J. P.; Biedermann, P.: - Take good care of my fungi - Fungus-spore carrying organs in Tryopodendron ambrosia beetles. Mitteilungen der Deutschen Gesellschaft für allgemeine und angewandte Entomologie 22, 2019 more…BibTeX
Lin, L.; Wang, S.; Li, X.; He, Q.; Benz, J. P.; Tian, C.: STK-12 acts as a transcriptional brake to control the expression of cellulase-encoding genes in Neurospora crassa. PLOS Genetics 15 (11), 2019, e1008510 more…BibTeX
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Protzko, R. J.; Hach, C. A.; Coradetti, S. T.; Hackhofer, M. A.; Magosch, S.; Thieme, N.; Geiselman, G. M.; Arkin, A.P.; .Skerker, J. M.; Dueber, J. E.; .Benz, J. P.: Genomewide and Enzymatic Analysis Reveals Efficient D-Galacturonic Acid Metabolism in the Basidiomycete Yeast Rhodosporidium toruloides. mSystems 4 (6), 2019 more…BibTeX
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Schmitz, K.; Protzko, R.; Zhang, L.; Benz, J. P.: Spotlight on fungal pectin utilization—from phytopathogenicity to molecular recognition and industrial applications. Applied Microbiology and Biotechnology 103 (6), 2019, 2507-2524 more…BibTeX
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Schmitz, K.; Wagner, S.; Reppke, M.; Maier, C. L.; Windeisen-Holzhauser, E.; Benz, J. P.: Preserving cultural heritage: Analyzing the antifungal potential of ionic liquids tested in paper restoration. PLOS ONE 14 (9), 2019, e0219650 more…BibTeX
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2018
Journal Articles
Kumar, A.; Sørensen, J. L.; Hansen, F. T.; Arvas, M.; Syed, M. F.; Hassan, L.; Benz, J. P.; Record, E.; Henrissat, B.; Pöggeler, S.; Kempken, F.: Genome Sequencing and analyses of Two Marine Fungi from the North Sea Unraveled a Plethora of Novel Biosynthetic Gene Clusters. Scientific Reports 8 (1), 2018 more…BibTeX
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Lehenberger, M.; Benz, J.P.; Müller, J.; Biedermann P.: Trypodendron domesticum (Linné) und Trypodendron lineatum (Olivier) (Curculionidae;Scolytinae) als potentielle Vektoren von xylobionten und sapro-xylobionten Pilzen. Mitt. Dtsch. Ges. Allg. Angew. Ent. 21, 2018 more…BibTeX
Protzko, R.J.; Latimer, L. N.; Martinho, Z.; de Reus, E.; Seibert, T.; Benz, J.P.; Dueber, J.E.: Engineering Saccharomyces cerevisiae for co-utilization of d-galacturonic acid and d-glucose from citrus peel waste. Nature Communications 9 (1), 2018 more…BibTeX
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Ranger, C. M.; Biedermann, P.H. W.; Phuntumart, V.; Beligala, G. U.; Ghosh, S.; Palmquist, D.E.; Mueller, R.; Barnett, J.; Schultz, P, .; Reding, M. E.; Benz, J. P.: Symbiont selection via alcohol benefits fungus farming by ambrosia beetles. Proceedings of the National Academy of Sciences 115 (17), 2018, 4447-4452 more…BibTeX
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Young, D.; Dollhofer, V.; Callaghan, T. M..; Reitberger, S.; Lebuhn, M.; Benz, J. P.: Isolation, identification and characterization of lignocellulolytic aerobic and anaerobic fungi in one- and two-phase biogas plants. Bioresource Technology 268, 2018, 470-479 more…BibTeX
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2017
Journal Articles
Bari, E.; Karim, M.; Oladi, R.; Tajick Ghanbary, M. A.; Ghodskhah Daryaei. M.; Schmidt, O.; Benz, J. P.; Emaminasab, M.: A comparison between decay patterns of the white-rot fungus Pleurotus ostreatus in chestnut-leaved oak (Quercus castaneifolia) shows predominantly simultaneous attack both in vivo and in vitro. Forest Pathology 47 (4), 2017, e12338 more…BibTeX
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Hassan, L.; Reppke, M. J.; Thieme, N.; Schweizer, S. A.; Mueller, C. W.; Benz, J. P.: Comparing the physiochemical parameters of three celluloses reveals new insights into substrate suitability for fungal enzyme production. Fungal Biology and Biotechnology 4 (1), 2017 more…BibTeX
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Mechelke, M.; Herlet, J.; Benz, J. P.; Schwarz, W. H.; Zverlov, V.V.; Liebl, W.; Kornberger, P.: HPAEC-PAD for oligosaccharide analysis—novel insights into analyte sensitivity and response stability. Analytical and Bioanalytical Chemistry 409 (30), 2017, 7169-7181 more…BibTeX
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Samal, A.; Craig, J. P.; Coradetti, S. T.; Benz, J. P.; Eddy, J. A.; Price, N. D.; Glass, N. L.: Network reconstruction and systems analysis of plant cell wall deconstruction by Neurospora crassa. Biotechnology for Biofuels 10 (1), 2017 more…BibTeX
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Thieme, N.; Wu, V. W.; Dietschmann, A.; Salamov, A.A.; Wang, M.; Johnson, J.; Singan, V.R.; Grigoriev, I.V.; Glass, N. L.; Somerville, C. R.; Benz, J. P.: The transcription factor PDR-1 is a multi-functional regulator and key component of pectin deconstruction and catabolism in Neurospora crassa. Biotechnology for Biofuels 10 (1), 2017 more…BibTeX
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2016
Books / Contributions to Collections
Seibert, T.; Thieme, N.; Benz, J. P.: The Renaissance of Neurospora crassa: How a Classical Model System is Used for Applied Research. In: Fungal Biology. Springer International Publishing, 2016 more…BibTeX
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2015
Journal Articles
Fan, F.; Ma, G,; Li, J.; .Liu, Q.; Benz, J. P.; Tian, C.; Ma, Y.: Genome-wide analysis of the endoplasmic reticulum stress response during lignocellulase production in Neurospora crassa. Biotechnology for Biofuels 8 (1), 2015 more…BibTeX
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Kumar, A.; Henrissat, B.; Arvas, M.; Syed, M.F.; Thieme, N.; Benz, J. P.; Sørensen, J. L.; Record, E.; Pöggeler, S.; Kempken, F.: De Novo Assembly and Genome Analyses of the Marine-Derived Scopulariopsis brevicaulis Strain LF580 Unravels Life-Style Traits and Anticancerous Scopularide Biosynthetic Gene Cluster. PLOS ONE 10 (10), 2015, e0140398 more…BibTeX
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Li, J.; Xu, J.; Cai, P.; Wang, B.; Ma, Y.; Benz, J. P.; Tian, C.: Functional Analysis of Two l-Arabinose Transporters from Filamentous Fungi Reveals Promising Characteristics for Improved Pentose Utilization in Saccharomyces cerevisiae. Applied and Environmental Microbiology 81 (12), 2015, 4062-4070 more…BibTeX
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2014
Journal Articles
Benz, J.P.; Protzko, R.J; Andrich, J. MS; Bauer, S.; Dueber, J. E.; Somerville, C.R.: Identification and characterization of a galacturonic acid transporter from Neurospora crassa and its application for Saccharomyces cerevisiae fermentation processes. Biotechnology for Biofuels 7 (1), 2014, 20 more…BibTeX
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2013
Journal Articles
Benz, J. P.; Chau, B.H.; Zheng, D,; Bauer, S.; Glass, N. L.; Somerville, C. R.: A comparative systems analysis of polysaccharide-elicited responses inNeurospora crassareveals carbon source-specific cellular adaptations. Molecular Microbiology 91 (2), 2013, 275-299 more…BibTeX
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2012
Journal Articles
Lintala, M.; Lehtimäki, N.; Benz, J. P.; Jungfer, A.; Soll, J.; Aro, E.-M.; Bölter, B.; Mulo, P.: Depletion of leaf-type ferredoxin-NADP+ oxidoreductase results in the permanent induction of photoprotective mechanisms in Arabidopsis chloroplasts. The Plant Journal 70 (5), 2012, 809-817 more…BibTeX
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2011
Journal Articles
Kovács-Bogdán, E.; Benz, J P.; Soll, J.; Bölter, B.: Tic20 forms a channel independent of Tic110 in chloroplasts. BMC Plant Biology 11 (1), 2011, 133 more…BibTeX
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2010
Journal Articles
Alte, F.; Stengel, A.; Benz, J. P.; Petersen, E.; Soll, J.; Groll, M.; Bolter, B.: Ferredoxin:NADPH oxidoreductase is recruited to thylakoids by binding to a polyproline type II helix in a pH-dependent manner. Proceedings of the National Academy of Sciences 107 (45), 2010, 19260-19265 more…BibTeX
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Benz, J. P.; Lintala, M.; Soll, J.; Mulo, P.; Bölter, B.: A new concept for ferredoxin–NADP(H) oxidoreductase binding to plant thylakoids. Trends in Plant Science 15 (11), 2010, 608-613 more…BibTeX
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Stengel, A.; Benz, J. P.; Soll, J.; Bölter, B.: Redox-regulation of protein import into chloroplasts and mitochondria: Similarities and differences. Plant Signaling & Behavior (5(2)), 2010, 105-109 more…BibTeX
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Stengel, A.; Benz, J. P.; Soll, J.; Bölter, B.: Redox-regulation of protein import into chloroplasts and mitochondria. Plant Signaling & Behavior 5 (2), 2010, 105-109 more…BibTeX
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2009
Journal Articles
Benz, J. P.; Soll, J.; Bölter, B.: Protein transport in organelles: The composition, function and regulation of the Tic complex in chloroplast protein import. FEBS Journal 276 (5), 2009, 1166-1176 more…BibTeX
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Benz, J.P.; Stengel, A.; Lintala, M.; Lee, Y.-H.; Weber, A.; Philippar, K.; Gugel, I.L.; Kaieda, S.; Ikegami, T.; Mulo, P.; Soll, J.; Bolter, B.: Arabidopsis Tic62 and Ferredoxin-NADP(H) Oxidoreductase Form Light-Regulated Complexes That Are Integrated into the Chloroplast Redox Poise. The Plant Cell 21 (12), 2009, 3965-3983 more…BibTeX
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Stengel, A.; Benz, J. P.; Buchanan, B.B.; Soll, J.; Bölter, B.: Preprotein Import into Chloroplasts via the Toc and Tic Complexes Is Regulated by Redox Signals in Pisum sativum. Molecular Plant 2 (6), 2009, 1181-1197 more…BibTeX
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2008
Journal Articles
Stengel, A.; Benz, J.P.; Balsera, M.; Soll, J.; Bölter, B.: TIC62 Redox-regulated Translocon Composition and Dynamics. Journal of Biological Chemistry 283 (11), 2008, 6656-6667 more…BibTeX
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2007
Books / Contributions to Collections
Benz, J. P.; Soll, J. ; Bölter, B.: The Role of the Tic Machinery in Chloroplast Protein Import. In: Molecular Machines Involved in Protein Transport across Cellular Membranes. Elsevier, 2007 more…BibTeX
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